File List

Here is a list of all files with brief descriptions:

address.h
alloc_failure.hpp
amiga_debugging.h
amiga_platform.h	None of these functions should be called directly, they will be set up by the generated system and all code should use the platform-agnostic AllocMemory(), AllocMemoryArray() and FreeMemory() instead
args_processor.hpp
async_system_blast_tool.hpp	Async_system_blast_tool.hpp
async_system_polymarker_tool.hpp	System_polymarker_tool.hpp
async_task.h
async_tasks_manager.h
audit.h	Audit.h
blank_row.h
blast_app_parameters.h
blast_formatter.h
blast_service.h
blast_service_api.h
blast_service_job.h
blast_service_job_markup.h
blast_service_job_markup_keys.h
blast_service_params.h
blast_tool.hpp
blast_tool_factory.hpp
blast_util.h
blastn_service.h
blastp_service.h
blastx_service.h
boolean_parameter.h
brapi_location.h
brapi_method.h
brapi_module.h
brapi_program.h
brapi_study.h
brapi_trait.h
brapi_trial.h
browse_programme_history.h
browse_study_history.h
browse_trial_history.h
byte_buffer.h
byte_buffer_args_processor.hpp
char_parameter.h
ckan_search_tool.h
connect.h
connection.h
coordinate.h
count_async_task.h
country_codes.h
crop.h
crop_jobs.h
crop_ontology_tool.h
curl_tools.h
data_linked_list.h
data_resource.h
design.h
dfw_field_trial_service.h
dfw_field_trial_service_data.h
dfw_field_trial_service_library.h
dfw_util.h
discard_row.h
double_linked_list.h
double_parameter.h
doxygen_groups.h
drmaa_blast_tool.hpp
drmaa_blast_tool_factory.hpp
drmaa_library.h
drmaa_service_job.h
drmaa_tool.h
drmaa_tool_args_processor.hpp
drmaa_util.h
edit_plot.h
encode_dcc_metadata.h
event_consumer.h	Event_consumer.h
experimental_area_phenotype.h
external_blast_tool.hpp
external_blast_tool_factory.hpp
field.h
field_trial.h
field_trial_jobs.h
field_trial_mongodb.h
field_trial_sqlite.h
file_output_stream.h
file_streamer.h
files_metadata.h
filesystem_utils.h
frictionless_data_util.h
gene_bank.h
gene_bank_jobs.h
genotype_metadata.h
geocoder_util.h
germplasm_cache.h
germplasm_country_codes.h
germplasm_markup.h
germplasm_service.h
germplasm_service_data.h
germplasm_service_library.h
google.h
grassroots_frictionless_data_library.h
grassroots_geocoder_library.h
grassroots_handler_library.h
grassroots_plugin_library.h
grassroots_server.h
grassroots_service_library.h
grassroots_service_manager_library.h
grassroots_task_library.h
grassroots_users_library.h
grassroots_util_library.h
handbook_generator.h
handler.h
handler_utils.h
hash_table.h
highlighter.h
htcondor_env_patch.h
image_util.h
indexing.h
instrument.h
int_linked_list.h	A doubly-linked list of integers
integer_observation.h
io_utils.h
irods_connection.h
irods_search_service_library.h
irods_util.h
irods_util_library.h
jobs_manager.h
json_parameter.h
json_processor.h
json_tools.h
json_util.h
key_value_pair.h
library.h
linked_list.h	A doubly-linked list
linked_list_iterator.h
linked_service.h
linux_sync_data.h
location.h
location_jobs.h
lucene_document.h
lucene_facet.h
lucene_library.h
lucene_tool.h
mac_sync_data.h
magic_blast_service.h
mapped_parameter.h
material.h
material_jobs.h
math_utils.h
measured_variable.h
measured_variable_jobs.h
memory_allocations.h
meta_search.h	A set of routines to perform a metadata-based search of an iRODS server. It uses the iCAT functionality
mongo_client_manager.h	Mongo_client_manager.h
mongodb_library.h
mongodb_tool.h
mongodb_util.h
network_library.h
nominal_scale_class.h
nominatim.h
numeric_observation.h
observation.h
operation.h
paired_blast_service.h
paired_samtools_service.h	Paired_samtools_service.h
paired_service.h
parameter.h
parameter_group.h
parameter_set.h
parameter_type.h	Parameter_type.h
parental_genotype_service.h
parental_genotype_service_data.h
parental_genotype_service_library.h
pathogenomics_service.h
pathogenomics_service_data.h
pathogenomics_service_library.h
pathogenomics_utils.h
permission.h
permissions_editor.h
person.h
person_jobs.h
phenotype_jobs.h
phenotype_metadata.h
phenotype_statistics.h
platform.h
plot.h
plot_jobs.h
plots_cache.h
plugin.h
polymarker_formatter.hpp	Polymarker_formatter.hpp
polymarker_linked_service.h
polymarker_service.h
polymarker_service_job.h
polymarker_tool.hpp	Polymarker_tool.hpp
polymarker_utils.h	Polymarker_utils.h
primer3_prefs.h
programme.h
programme_jobs.h
provider.h
providers_state_table.h
query.h
query_util.h
raw_connection.h
referred_service.h
regular_expressions.h	Regular_expressions.h
remote_parameter_details.h
remote_service_job.h
request_tools.h
resource_parameter.h
row.h
row_jobs.h
row_phenotype.h
row_processor.h
sample_metadata.h
samtools_service.h
schema_keys.h	The keys for the Grassroots Schema
schema_term.h
schema_version.h
search_options.h
field-trials/include/search_service.h
parental-genotype/include/search_service.h
search/include/search_service.h
search_service_data.h
search_service_library.h
servers_manager.h
service.h
service_job.h
service_job_set_iterator.h
service_matcher.h
service_metadata.h
service_util.h
signed_int_parameter.h
sql_clause.h
sql_clause_list.h
sqlite_column.h
sqlite_library.h
sqlite_tool.h
standard_row.h
statistics.h
streams.h
string_array_parameter.h
string_hash_table.h
string_int_pair.h
string_linked_list.h	A doubly-linked list of strings
string_observation.h
string_parameter.h
string_utils.h	A set of string functions
strings_args_processor.hpp
study.h
study_jobs.h
study_manager.h
submission_service.h
submit_crop.h
submit_drilling.h
submit_field_trial.h
submit_gene_bank.h
submit_location.h
submit_material.h
submit_measured_variables.h
submit_plots.h
submit_program.h
submit_study.h
submit_treatment.h
submit_treatment_factor.h
sync_data.h
system_async_task.h	Process.h
system_blast_tool.hpp
system_blast_tool_factory.hpp
system_util.h
blast/include/temp_file.hpp
polymarker/include/temp_file.hpp
threaded_blast_tool.hpp
threaded_paired_service.h	Threaded_paired_service.h
time_array_parameter.h
time_observation.h
time_parameter.h
time_util.h
treatment.h
treatment_factor.h
treatment_factor_jobs.h
treatment_factor_value.h
treatment_jobs.h
typedefs.h
unsigned_int_parameter.h
user.h	Routines to query user data objects and collections
user_details.h
user_group.h
user_util.h
uuid_defs.h
uuid_util.h
uuid_util_library.h
view_format.h
web_service.h
web_service_library.h
web_service_util.h
windows_sync_data.h
windows_uuid.h