sample_metadata.h

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/*
** Copyright 2014-2016 The Earlham Institute
** 
** Licensed under the Apache License, Version 2.0 (the "License");
** you may not use this file except in compliance with the License.
** You may obtain a copy of the License at
** 
**     http://www.apache.org/licenses/LICENSE-2.0
** 
** Unless required by applicable law or agreed to in writing, software
** distributed under the License is distributed on an "AS IS" BASIS,
** WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
** See the License for the specific language governing permissions and
** limitations under the License.
*/
 
/*
 * sample_metadata.h
 *
 *  Created on: 1 Jul 2015
 *      Author: tyrrells
 */
 
#ifndef SAMPLE_METADATA_H_
#define SAMPLE_METADATA_H_
 
 
#include "pathogenomics_service_library.h"
#include "pathogenomics_service_data.h"
 
#include "pathogenomics_service.h"
 
#ifdef __cplusplus
extern "C"
{
#endif
 
 
 
PATHOGENOMICS_SERVICE_LOCAL bool GetLocationData (json_t *row_p, const char * const id_s, GrassrootsServer *grassroots_p);
 
 
 
PATHOGENOMICS_SERVICE_LOCAL bool ConvertDate (json_t *row_p);
 
 
 
 
PATHOGENOMICS_SERVICE_LOCAL bool RefineLocationDataForOpenCage (PathogenomicsServiceData *service_data_p, json_t *row_p, const json_t *raw_data_p, const char * const town_s, const char * const county_s);
 
 
PATHOGENOMICS_SERVICE_LOCAL const char *InsertSampleData (MongoTool *tool_p, json_t *values_p, const uint32 stage_time, PathogenomicsServiceData *data_p);
 
 
PATHOGENOMICS_SERVICE_LOCAL bool CheckSampleData (const LinkedList *headers_p, ServiceJob *job_p, PathogenomicsServiceData *data_p);
 
#ifdef __cplusplus
}
#endif
 
 
#endif /* SAMPLE_METADATA_H_ */