async_system_blast_tool.hpp

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/*
** Copyright 2014-2016 The Earlham Institute
**
** Licensed under the Apache License, Version 2.0 (the "License");
** you may not use this file except in compliance with the License.
** You may obtain a copy of the License at
**
**     http://www.apache.org/licenses/LICENSE-2.0
**
** Unless required by applicable law or agreed to in writing, software
** distributed under the License is distributed on an "AS IS" BASIS,
** WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
** See the License for the specific language governing permissions and
** limitations under the License.
*/
#ifndef SERVER_SRC_SERVICES_BLAST_INCLUDE_ASYNC_SYSTEM_BLAST_TOOL_HPP_
#define SERVER_SRC_SERVICES_BLAST_INCLUDE_ASYNC_SYSTEM_BLAST_TOOL_HPP_
 
 
#include "system_blast_tool.hpp"
#include "count_async_task.h"
#include "system_async_task.h"
 
class BLAST_SERVICE_LOCAL AsyncSystemBlastTool : public SystemBlastTool
{
public:
  AsyncSystemBlastTool (BlastServiceJob *service_job_p, const char *name_s, const char *factory_s, const BlastServiceData *data_p, const char *blast_program_name_s);
 
 
 
  AsyncSystemBlastTool (BlastServiceJob *job_p, const BlastServiceData *data_p, const json_t *json_p);
 
  virtual ~AsyncSystemBlastTool ();
 
  virtual bool AddToJSON (json_t *root_p);
 
  virtual OperationStatus Run ();
 
 
  virtual bool PreRun ();
 
 
  virtual OperationStatus GetStatus (bool update_flag = true);
 
 
  virtual char *GetResults (BlastFormatter *formatter_p);
 
 
private:
  static const char * const ASBT_ASYNC_S;
  static const char * const ASBT_LOGFILE_S;
 
  char *asbt_async_logfile_s;
  SystemAsyncTask *asbt_task_p;
};
 
 
#endif /* SERVER_SRC_SERVICES_BLAST_INCLUDE_ASYNC_SYSTEM_BLAST_TOOL_HPP_ */